Amino Acids

Properties of Amino Acids

The proteins in all living species, from bacteria to humans, are constructed from the same set of 20 amino acids. Humans can synthesize only about half of the needed amino acids; the remainder must be obtained from the diet and are known as essential amino acids.

The amino acids are colorless, nonvolatile, crystalline solids, melting and decomposing at temperatures above 200°C. These melting temperatures are more like those of ionic salts than those of covalent compounds and indicate that the structures of the amino acids in the solid state and in neutral solution are best represented as having both a negatively charged group and a positively charged group. Such a species is known as a zwitterion.
On the left: An alpha-amino acid is drawn as a zwitterion. There is a positive charge on the nitrogen on the left side of the molecule and a negative charge on on of the oxygen atoms at the right side of the molecule. On the right: An alpha-amino acid is drawn as an uncharged molecule; not an accurate representation of the amino acid structure.

Classification of Amino Acids

Each amino acid has a unique side chain or R group attached to the α-carbon. The size, shape, solubility and ionization properties of the R group gives each amino acid its unique characteristics. As a result, the side chains of amino acids exert a profound effect on the structure and biological activity of proteins. Although amino acids can be classified in various ways, one common approach is to classify them according to whether the functional group on the side chain at neutral pH is nonpolar, polar but uncharged, negatively charged, or positively charged.

The structures and names of are given in the following guide to the twenty common amino acids.

A guide to the twenty common amino acids by Compound Interest. Source: https://www.compoundchem.com/2014/09/16/aminoacids/
A guide to the twenty common amino acids by Compound Interest. Source: https://www.compoundchem.com/2014/09/16/aminoacids/

The first amino acid to be isolated was asparagine in 1806. It was obtained from protein found in asparagus juice (hence the name). Glycine, the major amino acid found in gelatin, was named for its sweet taste (Greek glykys, meaning “sweet”).

Amino Acids and Chirality

We learned in our chapter on carbohydrates that all naturally occurring sugars belong to the D series. It is interesting, therefore, that nearly all known plant and animal proteins are composed entirely of L-amino acids. As with sugars, chemists use glyceraldehyde as the reference compound for the assignment of configuration to amino acids. Its structure closely resembles an amino acid structure except that in the latter, a nitrogen group takes the place of the OH group on the chiral carbon of the sugar.

On the left is the structure of L-(-)-glyceraldehyde. The OH group on the central carbon is oriented to the left. In the middle is the structure of an L-amino acid. The nitrogen group on the central carbon is oriented to the left. On the right is the structure of a D-amino acid. The nitrogen group on the central carbon is oriented to the right.


Attributions

This page is based on “Chemistry 2e” by Paul Flowers, Klaus Theopold, Richard Langley, William R. Robinson, PhDOpenstax which is licensed under CC BY 4.0. Access for free at https://openstax.org/books/chemistry-2e/pages/1-introduction

This page is based on “The Basics of General, Organic, and Biological Chemistry” by David W Ball, John W Hill, Rhonda J ScottSaylor which is licensed under CC BY-NC-SA 4.0. Access for free at http://saylordotorg.github.io/text_the-basics-of-general-organic-and-biological-chemistry/index.html

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Chemistry of Food and Cooking Copyright © 2022 by Jessica Wittman is licensed under a Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International License, except where otherwise noted.